pyBigWig pyBigWig - 锐客网

安装deepTools需要依赖pyBigWig包。
安装pyBigWig包时出错：

$ pip install pyBigWig==0.2.5

Downloading/unpacking pyBigWig==0.2.5 Downloading pyBigWig-0.2.5.tar.gz (48kB): 48kB downloaded Running setup.py (path:/tmp/pip_build_labubuntu/pyBigWig/setup.py) egg_info for package pyBigWig /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distributionoption: 'classifier' warnings.warn(msg)warning: no files found matching 'galaxy/*' warning: no previously-included files found matching 'pyBigWig.egg-info/*' Installing collected packages: pyBigWig Running setup.py install for pyBigWig /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distributionoption: 'classifier' warnings.warn(msg)warning: no files found matching 'galaxy/*' building 'pyBigWig' extension x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -IlibBigWig -I/usr/include/python2.7 -I/usr/include/python2.7 -c libBigWig/bwWrite.c -o build/temp.linux-x86_64-2.7/libBigWig/bwWrite.o In file included from libBigWig/bigWig.h:1:0, from libBigWig/bwWrite.c:6: libBigWig/io.h:1:23: fatal error: curl/curl.h: No such file or directory #include ^ compilation terminated. error: command 'x86_64-linux-gnu-gcc' failed with exit status 1 Complete output from command /usr/bin/python -c "import setuptools, tokenize; __file__='/tmp/pip_build_labubuntu/pyBigWig/setup.py'; exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))"install --record /tmp/pip-nDt9LG-record/install-record.txt --single-version-externally-managed --compile: /usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distributionoption: 'classifier'warnings.warn(msg)running installrunning buildrunning build_pycreating buildcreating build/lib.linux-x86_64-2.7creating build/lib.linux-x86_64-2.7/pyBigWigTestcopying pyBigWigTest/test.py -> build/lib.linux-x86_64-2.7/pyBigWigTestcopying pyBigWigTest/__init__.py -> build/lib.linux-x86_64-2.7/pyBigWigTestrunning egg_infowriting pyBigWig.egg-info/PKG-INFOwriting top-level names to pyBigWig.egg-info/top_level.txtwriting dependency_links to pyBigWig.egg-info/dependency_links.txtwarning: manifest_maker: standard file '-c' not foundreading manifest file 'pyBigWig.egg-info/SOURCES.txt'reading manifest template 'MANIFEST.in'warning: no files found matching 'galaxy/*'writing manifest file 'pyBigWig.egg-info/SOURCES.txt'copying pyBigWigTest/test.bw -> build/lib.linux-x86_64-2.7/pyBigWigTestrunning build_extbuilding 'pyBigWig' extensioncreating build/temp.linux-x86_64-2.7creating build/temp.linux-x86_64-2.7/libBigWigx86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall-Wstrict-prototypes -fPIC -IlibBigWig -I/usr/include/python2.7 -I/usr/include/python2.7 -c libBigWig/bwWrite.c -o build/temp.linux-x86_64-2.7/libBigWig/bwWrite.oIn file included from libBigWig/bigWig.h:1:0,from libBigWig/bwWrite.c:6:libBigWig/io.h:1:23: fatal error: curl/curl.h: No such file or directory #include ^compilation terminated.error: command 'x86_64-linux-gnu-gcc' failed with exit status 1---------------------------------------- Cleaning up... Command /usr/bin/python -c "import setuptools, tokenize; __file__='/tmp/pip_build_labubuntu/pyBigWig/setup.py'; exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-nDt9LG-record/install-record.txt --single-version-externally-managed --compilefailed with error code 1 in /tmp/pip_build_labubuntu/pyBigWig Storing debug log for failure in /home/labubuntu/.pip/pip.log

找到错误